Merging IRProject with an existing project is slightly more complicated than creating a project from scratch, and involves some human-driven steps.
Assuming your existing project's name is MyProject. The procedure to use IRProject to enhance your existing project is as follows:
svn co file:///Projects/IR/SourceRepository/IRProject trunk IRProject
mkdir irproject_build
cd irproject_build
cmake ../IRProject
make
cd ../
irproject_build/bin/make_project IRProject MyProject
cd MyProject
svn status
mkdir ../myproject-build
cd ../myproject-build
cmake <ANY OPTIONS YOU USUALLY USE> ../MyProject
make
make test
The "make test" command should at least run the example tests that came with IRProject, but should also run your own tests if you had any set up before importing IRProject.
Next, you should clean up and add the new files to your project
cd ../MyProject
svn add *
svn commit -m "Imported IRProject"